I didn't see where you pulled the head. LOL My advice was don't pull the head.
If you have a couple of studs where the nut won't come off then you'll be pulling the cylinders too because you broke the head loose and you need to replace the gasket. It can become a can of worms quickly. Anyway glad it came off for you.
How is your block drain on the right side of the engine at the bottom?
If you think you water passages are clogged you might be able to use a radiator flush but I'd be careful with the aluminum. I'm sure they make products that are aluminum safe. If the engine is heating up water is not getting through or as
@mikidymac says you have a pump issue. Good advice to pull the pump. Good Luck !!