I've used http://www.sea-doopartspitstop.com and http://www.cyclepartsnation.com. Interestingly, they both have similar prices, but sometimes one is a little higher than the other and sometimes the opposite is true. Shipping can be quite a bit different between the two for the same part (even though both are in the same state/similar distance to me), so you have to check shipping as well.
The big caveat is you need to be sure what you are ordering. Returning an item usually incurs a restocking fee of 15-20% and you eat the shipping, and some items are not at all returnable. So double or triple-check what you need if it's not returnable. Other than that, pretty good deals can be had.