Hey ixslr8, Welcome to the Seadoo Fourms! I looked at the Seadoo Repair manual for the 97 gsx, and I would first check the fuses in the Fuse box first. The MPEM (Muliti-Purpose Electrical Module)...also refered to as the computer, controls the workings of the ski. The power passes to the MPEM through a solenoid, and a 15 amp fuse in the rear electrical box to protect the MPEM. If someone connected the battery backwards it would spark like crazy and than blow the fuses due to a over load. I would check all the fuses, and try it again. The manual I was looking at is availiable to you to download from this site. If you join as a premium member you have acess to the seadoo Manual Library. The manual contains the Wire Diagrams,Diagnostic tests of electrical componets, Torque specs, Trouble shooting, Winterizing, assembly diagrams with pictures...ect. as a premium member you can read it on line or down it as a PDF file and print it if you perfer. You can download any manual for for any model as a member. Click on the link at the top under seadoo manuals for more details. A premium member also has a special post section for more advanced problems to be solved. If we can be of any more help let us know, and keep us posted on your progress.
Karl