Not that I am expert yet or anything, but I have a 96 SPX and this is what I have learned so far.
You might want to first start with getting the carbs cleaned. I had someone do it, but if you think you can do it yourself, they have threads on here where people have talked about doing it, plus they have the carb rebuild kits available.
Beyond that answer, if the problem isn't resolved (like mine was not) you might want to make sure your fuel valve is not gumed up (like mine was). Best way to do that, is when it blogs down on you in the water, flip the valve into res and then try again. It may blog down at first (due to the switch) but if it seems to run better after that change you may want to changed your valve. Not that hard to do, and it was only 30 bucks.
Also... if you have grey fuel lines you may want to change those out. (I just did) They may be what is causing the problem, as I have learned through this site, sea-doo made a bad batch of those lines, and they fall apart as gas flows through them.
Mine as of right now is not running, as can be seen in a thread below yours, but I feel everything I have done have all been good things to do. And hopefully I will get it running perfectly soon.