Water can only be coming from so many places. Have you checked your coolant levels? If you're coolant levels are low, then you could have a cracked or leaking cylinder head or cracked water passage somewhere in the block.
Your oil cooler is another place where coolant could be getting in as well (if it's cracked or leaking).
Your exhaust manifold is filled with water to cool it. When the engine is running the water is being forced out the exhaust. When you shut down the motor, the water in the manifold is no longer being pushed out. If you have a leak, that water will now seep into the engine, eventually making it's way into the oil.
Just because she runs fine, doesn't mean you don't have a leak. Water in the oil of sitting boats is commonly caused by exhaust manifold leaks. You've already ruled out the supercharger. Time to rule out all the others.
Also check this
post for more help.
Good luck.